HL_8V03_104
3D structure
- PDB id
- 8V03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- GUUCAAAUC
- Length
- 9 nucleotides
- Bulged bases
- 8V03|1|5|C|56, 8V03|1|5|A|57
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8V03_104 not in the Motif Atlas
- Geometric match to HL_4GCW_002
- Geometric discrepancy: 0.2956
- The information below is about HL_4GCW_002
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
8V03|1|5|G|53
8V03|1|5|U|54
8V03|1|5|U|55
8V03|1|5|C|56
8V03|1|5|A|57
8V03|1|5|A|58
8V03|1|5|A|59
8V03|1|5|U|60
8V03|1|5|C|61
Current chains
- Chain 5
- tRNA ProL (GGG)
Nearby chains
- Chain 1
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: