HL_8V9J_082

3D structure

PDB id

8V9J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) (Structure 4)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACUGAGAUACGGC

Length

14 nucleotides

Bulged bases

8V9J|1|a|U|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V9J|1|a|G|320
8V9J|1|a|A|321
8V9J|1|a|C|322
8V9J|1|a|U|323
8V9J|1|a|G|324
8V9J|1|a|A|325
8V9J|1|a|G|326
8V9J|1|a|A|327
8V9J|1|a|U|328
8V9J|1|a|A|329
8V9J|1|a|C|330
8V9J|1|a|G|331
8V9J|1|a|G|332
8V9J|1|a|C|333

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain p

30S ribosomal protein S16

Chain t

30S ribosomal protein S20