HL_8V9L_063
3D structure
- PDB id
- 8V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- AGUCCAUAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8V9L_063 not in the Motif Atlas
- Homologous match to HL_5J7L_193
- Geometric discrepancy: 0.1988
- The information below is about HL_5J7L_193
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_32735.2
- Basepair signature
- cWW-tSH-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8V9L|1|A|A|2695
8V9L|1|A|G|2696
8V9L|1|A|U|2697
8V9L|1|A|C|2698
8V9L|1|A|C|2699
8V9L|1|A|A|2700
8V9L|1|A|U|2701
8V9L|1|A|A|2702
8V9L|1|A|U|2703
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 8
- 50S ribosomal protein L36
- Chain G
- 50S ribosomal protein L6
- Chain O
- Large ribosomal subunit protein uL16
- Chain z
- Ribosome hibernation factor Balon (MSMEG_1130)
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