HL_8VK0_009

3D structure

PDB id

8VK0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

AUGUGAUACCGGGUAGGGGUUGU

Length

23 nucleotides

Bulged bases

8VK0|1|A|U|285, 8VK0|1|A|U|295, 8VK0|1|A|G|300, 8VK0|1|A|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VK0|1|A|A|282
8VK0|1|A|U|283
8VK0|1|A|G|284
8VK0|1|A|U|285
8VK0|1|A|G|286
8VK0|1|A|A|287
8VK0|1|A|U|288
8VK0|1|A|A|289
8VK0|1|A|C|290
8VK0|1|A|C|291
8VK0|1|A|G|292
8VK0|1|A|G|293
8VK0|1|A|G|294
8VK0|1|A|U|295
8VK0|1|A|A|296
8VK0|1|A|G|297
8VK0|1|A|G|298
8VK0|1|A|G|299
8VK0|1|A|G|300
8VK0|1|A|U|301
8VK0|1|A|U|302
8VK0|1|A|G|303
8VK0|1|A|U|304

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9