3D structure

PDB id
8VK0 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-A
Experimental method
ELECTRON MICROSCOPY
Resolution
3.14 Å

Loop

Sequence
UCUACCUG
Length
8 nucleotides
Bulged bases
None detected
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8VK0|1|A|U|337
8VK0|1|A|C|338
8VK0|1|A|U|339
8VK0|1|A|A|340
8VK0|1|A|C|341
8VK0|1|A|C|342
8VK0|1|A|U|343
8VK0|1|A|G|344

Current chains

Chain A
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:

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