HL_8VK0_051

3D structure

PDB id

8VK0 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX:50S-HflX-A

Experimental method

ELECTRON MICROSCOPY

Resolution

3.14 Å

Loop

Sequence

GGUGGUAACUAUAACCAUC

Length

19 nucleotides

Bulged bases

8VK0|1|A|A|2137, 8VK0|1|A|A|2140

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VK0|1|A|G|2130
8VK0|1|A|G|2131
8VK0|1|A|U|2132
8VK0|1|A|G|2133
8VK0|1|A|G|2134
8VK0|1|A|U|2135
8VK0|1|A|A|2136
8VK0|1|A|A|2137
8VK0|1|A|C|2138
8VK0|1|A|U|2139
8VK0|1|A|A|2140
8VK0|1|A|U|2141
8VK0|1|A|A|2142
8VK0|1|A|A|2143
8VK0|1|A|C|2144
8VK0|1|A|C|2145
8VK0|1|A|A|2146
8VK0|1|A|U|2147
8VK0|1|A|C|2148

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

GTPase HflX