HL_8VKW_028

3D structure

PDB id

8VKW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to delNTE-HflX

Experimental method

ELECTRON MICROSCOPY

Resolution

3.44 Å

Loop

Sequence

GGCCCCACAGGGUU

Length

14 nucleotides

Bulged bases

8VKW|1|A|C|1002, 8VKW|1|A|A|1003, 8VKW|1|A|C|1004

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VKW|1|A|G|997
8VKW|1|A|G|998
8VKW|1|A|C|999
8VKW|1|A|C|1000
8VKW|1|A|C|1001
8VKW|1|A|C|1002
8VKW|1|A|A|1003
8VKW|1|A|C|1004
8VKW|1|A|A|1005
8VKW|1|A|G|1006
8VKW|1|A|G|1007
8VKW|1|A|G|1008
8VKW|1|A|U|1009
8VKW|1|A|U|1010

Current chains

Chain A

23S ribosomal RNA

Nearby chains