HL_8VOQ_058

3D structure

PDB id

8VOQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 39 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site

Experimental method

ELECTRON MICROSCOPY

Resolution

9.3 Å

Loop

Sequence

GUCAACCCGAC

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VOQ|1|a|G|883
8VOQ|1|a|U|884
8VOQ|1|a|C|885
8VOQ|1|a|A|886
8VOQ|1|a|A|887
8VOQ|1|a|C|888
8VOQ|1|a|C|889
8VOQ|1|a|C|890
8VOQ|1|a|G|891
8VOQ|1|a|A|892
8VOQ|1|a|C|893

Current chains

Chain a

23S rRNA

Nearby chains

Chain X

30S ribosomal protein S13