HL_8VOS_018
3D structure
- PDB id
- 8VOS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Escherichia coli transcription-translation loosely coupled complex (TTC-LC) containing mRNA with a 60 nt long spacer, NusG, NusA, and fMet-tRNAs in E-site and P-site
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GUUAAUACC
- Length
- 9 nucleotides
- Bulged bases
- 8VOS|1|D|U|467
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VOS_018 not in the Motif Atlas
- Geometric match to HL_5J7L_012
- Geometric discrepancy: 0.1249
- The information below is about HL_5J7L_012
- Detailed Annotation
- GNRA wlth extra near cWW
- Broad Annotation
- GNRA wlth extra near cWW
- Motif group
- HL_81538.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
8VOS|1|D|G|462
8VOS|1|D|U|463
8VOS|1|D|U|464
8VOS|1|D|A|465
8VOS|1|D|A|466
8VOS|1|D|U|467
8VOS|1|D|A|468
8VOS|1|D|C|469
8VOS|1|D|C|470
Current chains
- Chain D
- 16S rRNA
Nearby chains
No other chains within 10ÅColoring options: