HL_8VPK_045

3D structure

PDB id

8VPK (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-B-Ery

Experimental method

ELECTRON MICROSCOPY

Resolution

2.63 Å

Loop

Sequence

CCUUUACG

Length

8 nucleotides

Bulged bases

8VPK|1|A|U|1946, 8VPK|1|A|U|1947, 8VPK|1|A|C|1949

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VPK|1|A|C|1943
8VPK|1|A|C|1944
8VPK|1|A|U|1945
8VPK|1|A|U|1946
8VPK|1|A|U|1947
8VPK|1|A|A|1948
8VPK|1|A|C|1949
8VPK|1|A|G|1950

Current chains

Chain A

23S ribosomal RNA

Nearby chains