HL_8VR4_031

3D structure

PDB id

8VR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GCUUAGAAGCAGC

Length

13 nucleotides

Bulged bases

8VR4|1|A|U|1183, 8VR4|1|A|U|1184, 8VR4|1|A|A|1188

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VR4|1|A|G|1181
8VR4|1|A|C|1182
8VR4|1|A|U|1183
8VR4|1|A|U|1184
8VR4|1|A|A|1185
8VR4|1|A|G|1186
8VR4|1|A|A|1187
8VR4|1|A|A|1188
8VR4|1|A|G|1189
8VR4|1|A|C|1190
8VR4|1|A|A|1191
8VR4|1|A|G|1192
8VR4|1|A|C|1193

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

GTPase HflX

Chain J

50S ribosomal protein L11