HL_8VR4_059

3D structure

PDB id

8VR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CCUGGACGGCAAUCAGG

Length

17 nucleotides

Bulged bases

8VR4|1|A|C|2537

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VR4|1|A|C|2524
8VR4|1|A|C|2525
8VR4|1|A|U|2526
8VR4|1|A|G|2527
8VR4|1|A|G|2528
8VR4|1|A|A|2529
8VR4|1|A|C|2530
8VR4|1|A|G|2531
8VR4|1|A|G|2532
8VR4|1|A|C|2533
8VR4|1|A|A|2534
8VR4|1|A|A|2535
8VR4|1|A|U|2536
8VR4|1|A|C|2537
8VR4|1|A|A|2538
8VR4|1|A|G|2539
8VR4|1|A|G|2540

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain B

5S ribosomal RNA; 5S rRNA

Chain F

50S Ribosomal Protein L5

Chain P

50S Ribosomal Protein L18