HL_8VRL_009

3D structure

PDB id

8VRL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and chloramphenicol:50S-HflX-A-Clm

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

UGUGAUACCGGGUAGGGGUUG

Length

21 nucleotides

Bulged bases

8VRL|1|A|U|285, 8VRL|1|A|C|291

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VRL|1|A|U|283
8VRL|1|A|G|284
8VRL|1|A|U|285
8VRL|1|A|G|286
8VRL|1|A|A|287
8VRL|1|A|U|288
8VRL|1|A|A|289
8VRL|1|A|C|290
8VRL|1|A|C|291
8VRL|1|A|G|292
8VRL|1|A|G|293
8VRL|1|A|G|294
8VRL|1|A|U|295
8VRL|1|A|A|296
8VRL|1|A|G|297
8VRL|1|A|G|298
8VRL|1|A|G|299
8VRL|1|A|G|300
8VRL|1|A|U|301
8VRL|1|A|U|302
8VRL|1|A|G|303

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain H

50S ribosomal protein L9