HL_8VRL_031

3D structure

PDB id

8VRL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and chloramphenicol:50S-HflX-A-Clm

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

8VRL|1|A|U|1183, 8VRL|1|A|U|1184, 8VRL|1|A|A|1188

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VRL|1|A|C|1182
8VRL|1|A|U|1183
8VRL|1|A|U|1184
8VRL|1|A|A|1185
8VRL|1|A|G|1186
8VRL|1|A|A|1187
8VRL|1|A|A|1188
8VRL|1|A|G|1189
8VRL|1|A|C|1190
8VRL|1|A|A|1191
8VRL|1|A|G|1192

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

GTPase HflX