HL_8VSA_110
3D structure
- PDB id
- 8VSA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GCGUGUCCGUCCGC
- Length
- 14 nucleotides
- Bulged bases
- 8VSA|1|TMRN|U|262
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VSA|1|TMRN|G|259
8VSA|1|TMRN|C|260
8VSA|1|TMRN|G|261
8VSA|1|TMRN|U|262
8VSA|1|TMRN|G|263
8VSA|1|TMRN|U|264
8VSA|1|TMRN|C|265
8VSA|1|TMRN|C|266
8VSA|1|TMRN|G|267
8VSA|1|TMRN|U|268
8VSA|1|TMRN|C|269
8VSA|1|TMRN|C|270
8VSA|1|TMRN|G|271
8VSA|1|TMRN|C|272
Current chains
- Chain TMRN
- TMRN
Nearby chains
- Chain S19
- 30S ribosomal protein S19
Coloring options: