HL_8VT5_002
3D structure
- PDB id
- 8VT5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of human menRNA
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.69 Å
Loop
- Sequence
- CCGG*G
- Length
- 5 nucleotides
- Bulged bases
- 8VT5|1|A|G|28
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VT5_002 not in the Motif Atlas
- Geometric match to HL_4L8H_001
- Geometric discrepancy: 0.1233
- The information below is about HL_4L8H_001
- Detailed Annotation
- Mini UNCG
- Broad Annotation
- No text annotation
- Motif group
- HL_90436.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 37
Unit IDs
8VT5|1|A|C|25
8VT5|1|A|C|27
8VT5|1|A|G|29
8VT5|1|A|G|28
*
8VT5|1|A|G|29
Current chains
- Chain A
- menRNA
Nearby chains
No other chains within 10ÅColoring options: