HL_8VTW_067

3D structure

PDB id

8VTW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.35 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

8VTW|1|1A|A|2820

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.3

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

8

Unit IDs

8VTW|1|1A|G|2819
8VTW|1|1A|A|2820
8VTW|1|1A|A|2821
8VTW|1|1A|G|2822
8VTW|1|1A|A|2823
8VTW|1|1A|C|2824
8VTW|1|1A|C|2825
8VTW|1|1A|A|2826
8VTW|1|1A|C|2827

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains

Chain 1E

50S ribosomal protein L3

Chain 1R

50S ribosomal protein L17

Chain 1T

50S ribosomal protein L19