3D structure

PDB id
8VUP (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon
Experimental method
ELECTRON MICROSCOPY
Resolution
3.4 Å

Loop

Sequence
UUUCGA
Length
6 nucleotides
Bulged bases
8VUP|1|1|C|140
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

8VUP|1|1|U|137
8VUP|1|1|U|138
8VUP|1|1|U|139
8VUP|1|1|C|140
8VUP|1|1|G|141
8VUP|1|1|A|142

Current chains

Chain 1
23S ribosomal RNA

Nearby chains

Chain T
Large ribosomal subunit protein uL23

Coloring options:

Copyright 2025 BGSU RNA group. Page generated in 0.1238 s