HL_8VUP_049
3D structure
- PDB id
- 8VUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- GUGAAGAUGC
- Length
- 10 nucleotides
- Bulged bases
- 8VUP|1|1|A|2030, 8VUP|1|1|A|2031, 8VUP|1|1|G|2032
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VUP_049 not in the Motif Atlas
- Geometric match to HL_5J7L_183
- Geometric discrepancy: 0.1374
- The information below is about HL_5J7L_183
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_61996.3
- Basepair signature
- cWW-tWH-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
8VUP|1|1|G|2027
8VUP|1|1|U|2028
8VUP|1|1|G|2029
8VUP|1|1|A|2030
8VUP|1|1|A|2031
8VUP|1|1|G|2032
8VUP|1|1|A|2033
8VUP|1|1|U|2034
8VUP|1|1|G|2035
8VUP|1|1|C|2036
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain R
- Ribosomal protein L21
- Chain b
- 50S ribosomal protein L32
Coloring options: