HL_8VUP_076

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GAACUGAGACACGGUC

Length

16 nucleotides

Bulged bases

8VUP|1|2|C|328

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|2|G|319
8VUP|1|2|A|320
8VUP|1|2|A|321
8VUP|1|2|C|322
8VUP|1|2|U|323
8VUP|1|2|G|324
8VUP|1|2|A|325
8VUP|1|2|G|326
8VUP|1|2|A|327
8VUP|1|2|C|328
8VUP|1|2|A|329
8VUP|1|2|C|330
8VUP|1|2|G|331
8VUP|1|2|G|332
8VUP|1|2|U|333
8VUP|1|2|C|334

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain u

30S ribosomal protein S16

Chain y

30S ribosomal protein S20