HL_8VV4_070

3D structure

PDB id

8VV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

8VV4|1|2|U|209

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8VV4_070 not in the Motif Atlas

Geometric match to HL_7L0Z_001

Geometric discrepancy: 0.2619

The information below is about HL_7L0Z_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.3

Basepair signature

cWW-tSW-F

Number of instances in this motif group

62

Unit IDs

8VV4|1|2|C|207
8VV4|1|2|U|208
8VV4|1|2|U|209
8VV4|1|2|C|210
8VV4|1|2|G|211
8VV4|1|2|G|212

Current chains

Chain 2

16S ribosomal RNA

Nearby chains