HL_8VVP_023

3D structure

PDB id

8VVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CGAAAAGGGG

Length

10 nucleotides

Bulged bases

8VVP|1|WA|A|1258

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVP|1|WA|C|1254
8VVP|1|WA|G|1255
8VVP|1|WA|A|1256
8VVP|1|WA|A|1257
8VVP|1|WA|A|1258
8VVP|1|WA|A|1259
8VVP|1|WA|G|1260
8VVP|1|WA|G|1261
8VVP|1|WA|G|1262
8VVP|1|WA|G|1263

Current chains

Chain WA

28S rRNA

Nearby chains