HL_8VVP_039
3D structure
- PDB id
- 8VVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- CAGUCGGCAGAGCGAGAAAGAGAGUGGAGCCGCGGACGCUACG
- Length
- 43 nucleotides
- Bulged bases
- 8VVP|1|WA|C|2096, 8VVP|1|WA|C|2262, 8VVP|1|WA|C|2268, 8VVP|1|WA|U|2269, 8VVP|1|WA|C|2271
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVP|1|WA|C|2089
8VVP|1|WA|A|2090
8VVP|1|WA|G|2091
8VVP|1|WA|U|2092
8VVP|1|WA|C|2093
8VVP|1|WA|G|2094
8VVP|1|WA|G|2095
8VVP|1|WA|C|2096
8VVP|1|WA|A|2097
8VVP|1|WA|G|2098
8VVP|1|WA|A|2099
8VVP|1|WA|G|2100
8VVP|1|WA|C|2101
8VVP|1|WA|G|2102
8VVP|1|WA|A|2103
8VVP|1|WA|G|2104
8VVP|1|WA|A|2105
8VVP|1|WA|A|2106
8VVP|1|WA|A|2107
8VVP|1|WA|G|2108
8VVP|1|WA|A|2109
8VVP|1|WA|G|2110
8VVP|1|WA|A|2111
8VVP|1|WA|G|2112
8VVP|1|WA|U|2113
8VVP|1|WA|G|2114
8VVP|1|WA|G|2115
8VVP|1|WA|A|2116
8VVP|1|WA|G|2117
8VVP|1|WA|C|2118
8VVP|1|WA|C|2260
8VVP|1|WA|G|2261
8VVP|1|WA|C|2262
8VVP|1|WA|G|2263
8VVP|1|WA|G|2264
8VVP|1|WA|A|2265
8VVP|1|WA|C|2266
8VVP|1|WA|G|2267
8VVP|1|WA|C|2268
8VVP|1|WA|U|2269
8VVP|1|WA|A|2270
8VVP|1|WA|C|2271
8VVP|1|WA|G|2272
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- L29
- Chain C
- uL4
- Chain E
- L6
- Chain F
- uL30
- Chain P
- eL18
- Chain PA
- L28
Coloring options: