HL_8VVP_121

3D structure

PDB id

8VVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUCAUAAGC

Length

9 nucleotides

Bulged bases

8VVP|1|ZA|G|1665

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVP|1|ZA|G|1658
8VVP|1|ZA|U|1659
8VVP|1|ZA|C|1660
8VVP|1|ZA|A|1661
8VVP|1|ZA|U|1662
8VVP|1|ZA|A|1663
8VVP|1|ZA|A|1664
8VVP|1|ZA|G|1665
8VVP|1|ZA|C|1666

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain QB

uS9

Chain TB

S19

Chain UB

uS10