HL_8VVR_017
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUGGGAAUG
- Length
- 10 nucleotides
- Bulged bases
- 8VVR|1|WA|G|294, 8VVR|1|WA|A|295, 8VVR|1|WA|A|296
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVR_017 not in the Motif Atlas
- Geometric match to HL_8CRE_219
- Geometric discrepancy: 0.1296
- The information below is about HL_8CRE_219
- Detailed Annotation
- T-loop related
- Broad Annotation
- T-loop
- Motif group
- HL_63894.2
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
8VVR|1|WA|C|289
8VVR|1|WA|U|290
8VVR|1|WA|U|291
8VVR|1|WA|G|292
8VVR|1|WA|G|293
8VVR|1|WA|G|294
8VVR|1|WA|A|295
8VVR|1|WA|A|296
8VVR|1|WA|U|297
8VVR|1|WA|G|298
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain K
- eL13
- Chain M
- eL15
- Chain NA
- eL42
- Chain P
- eL18
- Chain Z
- uL15
Coloring options: