HL_8VVR_034
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUGGUGUG
- Length
- 8 nucleotides
- Bulged bases
- 8VVR|1|WA|G|1823
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVR_034 not in the Motif Atlas
- Homologous match to HL_8GLP_027
- Geometric discrepancy: 0.3206
- The information below is about HL_8GLP_027
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_63894.4
- Basepair signature
- cWW-cWW-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8VVR|1|WA|C|1818
8VVR|1|WA|U|1819
8VVR|1|WA|G|1820
8VVR|1|WA|G|1821
8VVR|1|WA|U|1822
8VVR|1|WA|G|1823
8VVR|1|WA|U|1824
8VVR|1|WA|G|1825
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- L29
- Chain D
- uL18
- Chain S
- eL21
Coloring options: