HL_8VVR_107
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VVR_107 not in the Motif Atlas
- Geometric match to HL_8P9A_209
- Geometric discrepancy: 0.1836
- The information below is about HL_8P9A_209
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8VVR|1|ZA|A|957
8VVR|1|ZA|G|958
8VVR|1|ZA|G|959
8VVR|1|ZA|U|960
8VVR|1|ZA|G|961
8VVR|1|ZA|A|962
8VVR|1|ZA|A|963
8VVR|1|ZA|A|964
8VVR|1|ZA|U|965
8VVR|1|ZA|U|966
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain OB
- S14
- Chain TA
- Transfer RNA; tRNA
- Chain VA
- mRNA
- Chain WA
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: