HL_8VVS_033

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGCCGAAACGAUC

Length

13 nucleotides

Bulged bases

8VVS|1|WA|A|1767, 8VVS|1|WA|A|1768, 8VVS|1|WA|A|1769, 8VVS|1|WA|C|1770

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|WA|G|1762
8VVS|1|WA|G|1763
8VVS|1|WA|C|1764
8VVS|1|WA|C|1765
8VVS|1|WA|G|1766
8VVS|1|WA|A|1767
8VVS|1|WA|A|1768
8VVS|1|WA|A|1769
8VVS|1|WA|C|1770
8VVS|1|WA|G|1771
8VVS|1|WA|A|1772
8VVS|1|WA|U|1773
8VVS|1|WA|C|1774

Current chains

Chain WA

28S rRNA

Nearby chains

Chain J

uL5

Chain PB

S15

Chain SB

S18