HL_8VVS_081

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGAAAGGGG

Length

10 nucleotides

Bulged bases

8VVS|1|WA|A|4912, 8VVS|1|WA|A|4913, 8VVS|1|WA|G|4916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|WA|C|4908
8VVS|1|WA|G|4909
8VVS|1|WA|G|4910
8VVS|1|WA|A|4911
8VVS|1|WA|A|4912
8VVS|1|WA|A|4913
8VVS|1|WA|G|4914
8VVS|1|WA|G|4915
8VVS|1|WA|G|4916
8VVS|1|WA|G|4917

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL3

Chain N

uL13