HL_8VVS_088
3D structure
- PDB id
- 8VVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUGAAUUGCAGGACACAUUGAUC
- Length
- 23 nucleotides
- Bulged bases
- 8VVS|1|YA|A|80, 8VVS|1|YA|A|82, 8VVS|1|YA|A|84, 8VVS|1|YA|U|85, 8VVS|1|YA|U|86
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVS|1|YA|G|68
8VVS|1|YA|U|69
8VVS|1|YA|G|70
8VVS|1|YA|A|71
8VVS|1|YA|A|72
8VVS|1|YA|U|73
8VVS|1|YA|U|74
8VVS|1|YA|G|75
8VVS|1|YA|C|76
8VVS|1|YA|A|77
8VVS|1|YA|G|78
8VVS|1|YA|G|79
8VVS|1|YA|A|80
8VVS|1|YA|C|81
8VVS|1|YA|A|82
8VVS|1|YA|C|83
8VVS|1|YA|A|84
8VVS|1|YA|U|85
8VVS|1|YA|U|86
8VVS|1|YA|G|87
8VVS|1|YA|A|88
8VVS|1|YA|U|89
8VVS|1|YA|C|90
Current chains
- Chain YA
- 5.8S rRNA
Nearby chains
- Chain GA
- L35
- Chain IA
- L37
- Chain KA
- eL39
- Chain WA
- Large subunit ribosomal RNA; LSU rRNA
- Chain X
- L26
Coloring options: