HL_8VVS_106

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUAUUUUGUUGGUUUUCGG

Length

19 nucleotides

Bulged bases

8VVS|1|ZA|U|890, 8VVS|1|ZA|G|891, 8VVS|1|ZA|U|892

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|ZA|C|884
8VVS|1|ZA|U|885
8VVS|1|ZA|A|886
8VVS|1|ZA|U|887
8VVS|1|ZA|U|888
8VVS|1|ZA|U|889
8VVS|1|ZA|U|890
8VVS|1|ZA|G|891
8VVS|1|ZA|U|892
8VVS|1|ZA|U|893
8VVS|1|ZA|G|894
8VVS|1|ZA|G|895
8VVS|1|ZA|U|896
8VVS|1|ZA|U|897
8VVS|1|ZA|U|898
8VVS|1|ZA|U|899
8VVS|1|ZA|C|900
8VVS|1|ZA|G|901
8VVS|1|ZA|G|902

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain GB

eS6

Chain LB

S11