HL_8VVS_120

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUGCAAUUAUU

Length

12 nucleotides

Bulged bases

8VVS|1|ZA|U|1621, 8VVS|1|ZA|U|1622, 8VVS|1|ZA|A|1623

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|ZA|A|1614
8VVS|1|ZA|U|1615
8VVS|1|ZA|U|1616
8VVS|1|ZA|G|1617
8VVS|1|ZA|C|1618
8VVS|1|ZA|A|1619
8VVS|1|ZA|A|1620
8VVS|1|ZA|U|1621
8VVS|1|ZA|U|1622
8VVS|1|ZA|A|1623
8VVS|1|ZA|U|1624
8VVS|1|ZA|U|1625

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain PB

S15

Chain SB

S18

Chain TB

S19