Loop HL_8VWQ

3D structure

PDB id: 8VWQ (explore in PDB, NAKB, or RNA 3D Hub)
Description: E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)
Experimental method: ELECTRON MICROSCOPY
Resolution: 3.1 Å

Loop

Sequence: AGGAUGUUGGCUUAGAAGCAGCCAUCAUUUAAAGAAAGCGUAAUAGCUCACU
Length: 52 nucleotides
Bulged bases: 8VWQ|1|1|U|1061, 8VWQ|1|1|U|1066, 8VWQ|1|1|A|1067, 8VWQ|1|1|A|1070
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

8VWQ|1|1|A|1054
8VWQ|1|1|G|1055
8VWQ|1|1|G|1056
8VWQ|1|1|A|1057
8VWQ|1|1|U|1058
8VWQ|1|1|G|1059
8VWQ|1|1|U|1060
8VWQ|1|1|U|1061
8VWQ|1|1|G|1062
8VWQ|1|1|G|1063
8VWQ|1|1|C|1064
8VWQ|1|1|U|1065
8VWQ|1|1|U|1066
8VWQ|1|1|A|1067
8VWQ|1|1|G|1068
8VWQ|1|1|A|1069
8VWQ|1|1|A|1070
8VWQ|1|1|G|1071
8VWQ|1|1|C|1072
8VWQ|1|1|A|1073
8VWQ|1|1|G|1074
8VWQ|1|1|C|1075
8VWQ|1|1|C|1076
8VWQ|1|1|A|1077
8VWQ|1|1|U|1078
8VWQ|1|1|C|1079
8VWQ|1|1|A|1080
8VWQ|1|1|U|1081
8VWQ|1|1|U|1082
8VWQ|1|1|U|1083
8VWQ|1|1|A|1084
8VWQ|1|1|A|1085
8VWQ|1|1|A|1086
8VWQ|1|1|G|1087
8VWQ|1|1|A|1088
8VWQ|1|1|A|1089
8VWQ|1|1|A|1090
8VWQ|1|1|G|1091
8VWQ|1|1|C|1092
8VWQ|1|1|G|1093
8VWQ|1|1|U|1094
8VWQ|1|1|A|1095
8VWQ|1|1|A|1096
8VWQ|1|1|U|1097
8VWQ|1|1|A|1098
8VWQ|1|1|G|1099
8VWQ|1|1|C|1100
8VWQ|1|1|U|1101
8VWQ|1|1|C|1102
8VWQ|1|1|A|1103
8VWQ|1|1|C|1104
8VWQ|1|1|U|1105

Current chains

Chain 1: 23S ribosomal RNA

Nearby chains

Chain F: 50S ribosomal protein L6
Chain M: 50S ribosomal protein L16
Chain f: 50S ribosomal protein L36

HL_8VWQ_026