HL_8VWQ_038
3D structure
- PDB id
- 8VWQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGACACAG
- Length
- 8 nucleotides
- Bulged bases
- 8VWQ|1|1|A|1614, 8VWQ|1|1|A|1616, 8VWQ|1|1|A|1618
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VWQ_038 not in the Motif Atlas
- Geometric match to HL_5J7L_173
- Geometric discrepancy: 0.1171
- The information below is about HL_5J7L_173
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_89567.2
- Basepair signature
- cWW-F-F-F
- Number of instances in this motif group
- 8
Unit IDs
8VWQ|1|1|C|1612
8VWQ|1|1|G|1613
8VWQ|1|1|A|1614
8VWQ|1|1|C|1615
8VWQ|1|1|A|1616
8VWQ|1|1|C|1617
8VWQ|1|1|A|1618
8VWQ|1|1|G|1619
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain S
- 50S ribosomal protein L22
- Chain d
- 50S ribosomal protein L34
Coloring options: