HL_8W51_062

3D structure

PDB id

8W51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of YchF(H114A) on E.coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

C(OMU)GUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8W51_062 not in the Motif Atlas

Homologous match to HL_8VTW_061

Geometric discrepancy: 0.1085

The information below is about HL_8VTW_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

8W51|1|A|C|2551
8W51|1|A|OMU|2552
8W51|1|A|G|2553
8W51|1|A|U|2554
8W51|1|A|U|2555
8W51|1|A|C|2556
8W51|1|A|G|2557

Current chains

Chain A

23S rRNA

Nearby chains