HL_8WHX_026

3D structure

PDB id

8WHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UGAAAGG

Length

7 nucleotides

Bulged bases

8WHX|1|A|A|896, 8WHX|1|A|G|899

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WHX_026 not in the Motif Atlas

Homologous match to HL_7RQB_024

Geometric discrepancy: 0.0606

The information below is about HL_7RQB_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_74322.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

4

Unit IDs

8WHX|1|A|U|894
8WHX|1|A|G|895
8WHX|1|A|A|896
8WHX|1|A|A|897
8WHX|1|A|A|898
8WHX|1|A|G|899
8WHX|1|A|G|900

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L2