HL_8WHX_027

3D structure

PDB id

8WHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UUUAGG

Length

6 nucleotides

Bulged bases

8WHX|1|A|U|942, 8WHX|1|A|G|945

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WHX_027 not in the Motif Atlas

Homologous match to HL_5J7L_157

Geometric discrepancy: 0.1036

The information below is about HL_5J7L_157

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

8WHX|1|A|U|941
8WHX|1|A|U|942
8WHX|1|A|U|943
8WHX|1|A|A|944
8WHX|1|A|G|945
8WHX|1|A|G|946

Current chains

Chain A

23S rRNA

Nearby chains

Chain O

50S ribosomal protein L15