HL_8WHX_100

3D structure

PDB id

8WHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CGUUAUGG

Length

8 nucleotides

Bulged bases

8WHX|1|a|G|1120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WHX_100 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.4116

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WHX|1|a|C|1114
8WHX|1|a|G|1115
8WHX|1|a|U|1116
8WHX|1|a|U|1117
8WHX|1|a|A|1118
8WHX|1|a|U|1119
8WHX|1|a|G|1120
8WHX|1|a|G|1121

Current chains

Chain a

16S rRNA

Nearby chains