HL_8WI7_053

3D structure

PDB id

8WI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUAAAGAUGC

Length

10 nucleotides

Bulged bases

8WI7|1|A|G|2256

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WI7_053 not in the Motif Atlas

Homologous match to HL_7A0S_049

Geometric discrepancy: 0.349

The information below is about HL_7A0S_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61996.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

7

Unit IDs

8WI7|1|A|G|2251
8WI7|1|A|U|2252
8WI7|1|A|A|2253
8WI7|1|A|A|2254
8WI7|1|A|A|2255
8WI7|1|A|G|2256
8WI7|1|A|A|2257
8WI7|1|A|U|2258
8WI7|1|A|G|2259
8WI7|1|A|C|2260

Current chains

Chain A

23S rRNA

Nearby chains

Chain 5

50S ribosomal protein L32

Chain F

50S ribosomal protein L3

Chain U

50S ribosomal protein L21