HL_8WI7_063

3D structure

PDB id

8WI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AGUCCAUAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WI7_063 not in the Motif Atlas

Homologous match to HL_4WF9_056

Geometric discrepancy: 0.2573

The information below is about HL_4WF9_056

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32735.2

Basepair signature

cWW-tSH-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8WI7|1|A|A|2695
8WI7|1|A|G|2696
8WI7|1|A|U|2697
8WI7|1|A|C|2698
8WI7|1|A|C|2699
8WI7|1|A|A|2700
8WI7|1|A|U|2701
8WI7|1|A|A|2702
8WI7|1|A|U|2703

Current chains

Chain A

23S rRNA

Nearby chains