HL_8WI9_008

3D structure

PDB id

8WI9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, bS1 and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GACUGAGAUACGGC

Length

14 nucleotides

Bulged bases

8WI9|1|a|U|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WI9|1|a|G|320
8WI9|1|a|A|321
8WI9|1|a|C|322
8WI9|1|a|U|323
8WI9|1|a|G|324
8WI9|1|a|A|325
8WI9|1|a|G|326
8WI9|1|a|A|327
8WI9|1|a|U|328
8WI9|1|a|A|329
8WI9|1|a|C|330
8WI9|1|a|G|331
8WI9|1|a|G|332
8WI9|1|a|C|333

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S16

Chain u

30S ribosomal protein S20