HL_8WIB_006
3D structure
- PDB id
- 8WIB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- GAAACAUC
- Length
- 8 nucleotides
- Bulged bases
- 8WIB|1|A|A|195
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WIB_006 not in the Motif Atlas
- Geometric match to HL_4WF9_006
- Geometric discrepancy: 0.1085
- The information below is about HL_4WF9_006
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_48677.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8WIB|1|A|G|193
8WIB|1|A|A|194
8WIB|1|A|A|195
8WIB|1|A|A|196
8WIB|1|A|C|197
8WIB|1|A|A|198
8WIB|1|A|U|199
8WIB|1|A|C|200
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 1
- 50S ribosomal protein L28
- Chain C
- Transfer RNA; tRNA
- Chain O
- 50S ribosomal protein L15
Coloring options: