HL_8WIB_030

3D structure

PDB id

8WIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAAACAGC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WIB_030 not in the Motif Atlas

Homologous match to HL_5J7L_160

Geometric discrepancy: 0.1215

The information below is about HL_5J7L_160

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42998.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

8WIB|1|A|G|1096
8WIB|1|A|A|1097
8WIB|1|A|A|1098
8WIB|1|A|A|1099
8WIB|1|A|C|1100
8WIB|1|A|A|1101
8WIB|1|A|G|1102
8WIB|1|A|C|1103

Current chains

Chain A

23S rRNA

Nearby chains

Chain 3

50S ribosomal protein L30