HL_8WIC_009

3D structure

PDB id

8WIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UGUGAUACCGGGUAGGGGUUG

Length

21 nucleotides

Bulged bases

8WIC|1|A|U|285, 8WIC|1|A|C|290, 8WIC|1|A|G|292, 8WIC|1|A|U|301

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIC|1|A|U|283
8WIC|1|A|G|284
8WIC|1|A|U|285
8WIC|1|A|G|286
8WIC|1|A|A|287
8WIC|1|A|U|288
8WIC|1|A|A|289
8WIC|1|A|C|290
8WIC|1|A|C|291
8WIC|1|A|G|292
8WIC|1|A|G|293
8WIC|1|A|G|294
8WIC|1|A|U|295
8WIC|1|A|A|296
8WIC|1|A|G|297
8WIC|1|A|G|298
8WIC|1|A|G|299
8WIC|1|A|G|300
8WIC|1|A|U|301
8WIC|1|A|U|302
8WIC|1|A|G|303

Current chains

Chain A

23S rRNA

Nearby chains