HL_8WIC_075
3D structure
- PDB id
- 8WIC (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CAGCCGGUAG
- Length
- 10 nucleotides
- Bulged bases
- 8WIC|1|C|C|16, 8WIC|1|C|C|17, 8WIC|1|C|G|18, 8WIC|1|C|G|19, 8WIC|1|C|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8WIC_075 not in the Motif Atlas
- Homologous match to HL_4LCK_001
- Geometric discrepancy: 0.2154
- The information below is about HL_4LCK_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8WIC|1|C|C|13
8WIC|1|C|A|14
8WIC|1|C|G|15
8WIC|1|C|C|16
8WIC|1|C|C|17
8WIC|1|C|G|18
8WIC|1|C|G|19
8WIC|1|C|U|20
8WIC|1|C|A|21
8WIC|1|C|G|22
Current chains
- Chain C
- E-tRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: