HL_8WID_026

3D structure

PDB id

8WID (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CGUUAUGG

Length

8 nucleotides

Bulged bases

8WID|1|a|G|1120

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WID_026 not in the Motif Atlas

Homologous match to HL_6CZR_097

Geometric discrepancy: 0.4072

The information below is about HL_6CZR_097

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WID|1|a|C|1114
8WID|1|a|G|1115
8WID|1|a|U|1116
8WID|1|a|U|1117
8WID|1|a|A|1118
8WID|1|a|U|1119
8WID|1|a|G|1120
8WID|1|a|G|1121

Current chains

Chain a

16S rRNA

Nearby chains