HL_8WIF_008

3D structure

PDB id

8WIF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 30S ribosomal subunit (body 2) of 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GACUGAGAUACGGC

Length

14 nucleotides

Bulged bases

8WIF|1|a|U|328

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIF|1|a|G|320
8WIF|1|a|A|321
8WIF|1|a|C|322
8WIF|1|a|U|323
8WIF|1|a|G|324
8WIF|1|a|A|325
8WIF|1|a|G|326
8WIF|1|a|A|327
8WIF|1|a|U|328
8WIF|1|a|A|329
8WIF|1|a|C|330
8WIF|1|a|G|331
8WIF|1|a|G|332
8WIF|1|a|C|333

Current chains

Chain a

16S rRNA

Nearby chains

Chain q

30S ribosomal protein S16

Chain u

30S ribosomal protein S20