HL_8WRC_012

3D structure

PDB id

8WRC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-Resolved Ambient Temperature Kineto-Crystallographic Structure of Initiation Factor in Complex with Ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.59 Å

Loop

Sequence

CGACGAG

Length

7 nucleotides

Bulged bases

8WRC|1|A|C|461

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8WRC_012 not in the Motif Atlas

Homologous match to HL_4LFB_012

Geometric discrepancy: 0.1881

The information below is about HL_4LFB_012

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.5

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

428

Unit IDs

8WRC|1|A|C|458
8WRC|1|A|G|459
8WRC|1|A|A|460
8WRC|1|A|C|461
8WRC|1|A|G|462
8WRC|1|A|A|463
8WRC|1|A|G|474

Current chains

Chain A

16S rRNA

Nearby chains

Chain P

30S ribosomal protein S16