HL_8XSZ_019
3D structure
- PDB id
- 8XSZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 80S ribosome with Tigecycline, E-tRNA and P-tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GCGCGCC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8XSZ_019 not in the Motif Atlas
- Geometric match to HL_2Y8Y_001
- Geometric discrepancy: 0.4
- The information below is about HL_2Y8Y_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81100.2
- Basepair signature
- cWW
- Number of instances in this motif group
- 3
Unit IDs
8XSZ|1|L5|G|994
8XSZ|1|L5|C|995
8XSZ|1|L5|G|996
8XSZ|1|L5|C|1047
8XSZ|1|L5|G|1048
8XSZ|1|L5|C|1049
8XSZ|1|L5|C|1050
Current chains
- Chain L5
- 28S rRNA
Nearby chains
No other chains within 10ÅColoring options: