HL_8XT0_007
3D structure
- PDB id
- 8XT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the human 55S mitoribosome with 5um Tigecycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAGAGC
- Length
- 6 nucleotides
- Bulged bases
- 8XT0|1|L1|G|216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8XT0_007 not in the Motif Atlas
- Geometric match to HL_7RQB_011
- Geometric discrepancy: 0.1749
- The information below is about HL_7RQB_011
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_70546.1
- Basepair signature
- cWW-F
- Number of instances in this motif group
- 18
Unit IDs
8XT0|1|L1|G|214
8XT0|1|L1|A|215
8XT0|1|L1|G|216
8XT0|1|L1|A|217
8XT0|1|L1|G|218
8XT0|1|L1|C|219
Current chains
- Chain L1
- 16s rRNA
Nearby chains
- Chain L8
- Large ribosomal subunit protein mL64
- Chain LD
- Large ribosomal subunit protein uL4m
- Chain LO
- Large ribosomal subunit protein uL15m
- Chain Li
- Large ribosomal subunit protein bL35m
- Chain Lw
- Large ribosomal subunit protein mL49
- Chain Ly
- Large ribosomal subunit protein mL51
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